Publications from CMSI affiliates in the past quarter:
Agnew-Camiener, M. Victoria, Morgan E. Eisenlord, Carolyn S. Friedman, Harold J. Schreier, and Colleen A. Burge. 2025. “Pathogenicity and Phylogeny of Labyrinthula Spp. Isolated in Washington and Oregon, USA.” Journal of Eukaryotic Microbiology 72 (1): e13073. https://doi.org/10.1111/jeu.13073.
Aoki, Lillian R., Carmen J. Ritter, Deanna S. Beatty, Lia K. Domke, Ginny L. Eckert, Olivia J. Graham, Carla P. Gomes, et al. 2025. “Seagrass Wasting Disease Prevalence and Lesion Area Increase with Invertebrate Grazing across the Northeastern Pacific.” Ecology 106 (1): e4532. https://doi.org/10.1002/ecy.4532.
Chiu, Elliott S., Devinn M. Sinnott, Martha A. Delaney, Michael M. Garner, Lance Adams, Bill Van Bonn, Kathleen M. Colegrove, Katie Haman, Anibal G. Armién, and Karen Shapiro. 2025. “Clinicopathologic, Molecular, and Ultrastructural Features of Sarcocystis Pinnipedi Infection in 2 California Sea Lions with Fatal Necrotizing Hepatitis.” Journal of Veterinary Diagnostic Investigation, February, 10406387251321832. https://doi.org/10.1177/10406387251321832.
Cominassi, Louise, Amelie Segarra, Andrea Chandler, Md Habibullah-Al-Mamun, Katie Knaub, Kara E. Huff Hartz, Florian Mauduit, et al. 2025. “Sublethal Exposures to Bifenthrin Impact Stress Responses and Behavior of Juvenile Chinook Salmon.” Environmental Toxicology and Chemistry 44 (4): 973–83. https://doi.org/10.1093/etojnl/vgaf029.
Dichiera, Angelina M, Kelly D Hannan, Garfield T Kwan, Nann A Fangue, Patricia M Schulte, and Colin J Brauner. 2025. “Prior Thermal Acclimation Gives White Sturgeon a Fin up Dealing with Low Oxygen.” Conservation Physiology 13 (1): coae089. https://doi.org/10.1093/conphys/coae089.
Frawley, Timothy, Mikaela Provost, Lyall Bellquist, Noah Ben-Aderet, Hannah Blondin, Stephanie Brodie, Mercedes Pozo Buil, et al. 2025. “A Collaborative Climate Vulnerability Assessment of California Marine Fishery Species.” PLOS Climate 4 (2): e0000574. https://doi.org/10.1371/journal.pclm.0000574.
Graham, Olivia J., Lillian R. Aoki, Colleen A. Burge, and C. Drew Harvell. 2025. “Invertebrate Herbivores Influence Seagrass Wasting Disease Dynamics.” Ecology 106 (1): e4493. https://doi.org/10.1002/ecy.4493.
Griffiths, Joanna S., Kendall Smith, and Andrew Whitehead. 2025. “Seascape Genomics of Red Abalone: Limited Range-Wide Population Structure and Evidence for Local Adaptation.” Molecular Ecology 34 (4): e17650. https://doi.org/10.1111/mec.17650.
Halloran, Paul R., Thomas G. Bell, William J. Burt, Sophie N. Chu, Sophie Gill, Cameron Henderson, David T. Ho, et al. 2025. “Seawater Carbonate Chemistry Based Carbon Dioxide Removal: Towards Commonly Agreed Principles for Carbon Monitoring, Reporting, and Verification.” Frontiers in Climate 7 (February). https://doi.org/10.3389/fclim.2025.1487138.
Hannan, Kelly D, Anna E Steel, Mikayla R Debarros, Dennis E Cocherell, Sarah E Baird, and Nann A Fangue. 2025. “Endurance Swimming Performance and Physiology of Juvenile Green Sturgeon (Acipenser Medirostris) at Different Temperatures.” Conservation Physiology 13 (1): coaf003. https://doi.org/10.1093/conphys/coaf003.
Haworth, Lorna E., Sarah Nancollas, Susie N. Landa, Anne E. Todgham, and Richelle L. Tanner. 2025. “Invasion Stress Mitigates Climate Stress in a Brackish Marsh Amphipod.” Journal of Applied Ecology 62 (2): 253–66. https://doi.org/10.1111/1365-2664.14847.
Hitt, Lauren G., Malte Willmes, George Whitman, Mackenzie C. Miner, Carson Jeffres, Rachel C. Johnson, Dennis E. Cocherell, Nann A. Fangue, and Andrew L. Rypel. 2025. “Early Evidence for Establishment of a Chinook Salmon Population in a Restored Watershed.” Ecosphere 16 (3): e70207. https://doi.org/10.1002/ecs2.70207.
Johnson, Peter, James Crossman, Andy Miller, Brent Nichols, Jason McLellan, Matthew Howell, and Andrea Schreier. 2025. “Conservation Aquaculture of Wild-Origin Offspring Preserves Genetic Diversity in an Endangered Population of White Sturgeon.” Conservation Genetics 26 (2): 335–46. https://doi.org/10.1007/s10592-024-01670-2.
Knaub, Katie, Md Habibullah-Al-Mamun, Kara E. Huff Hartz, Gregory Whitledge, Louise Cominassi, Andrea Chandler, Mia Arkles, et al. 2025. “Development of a Response Spectrum Model for Bifenthrin in Juvenile Chinook Salmon (Oncorhynchus Tshawytscha).” Environmental Pollution 372 (May):126070. https://doi.org/10.1016/j.envpol.2025.126070.
Leprêtre, Maxime, Jens Hamar, Monica B. Urias, and Dietmar Kültz. n.d. “Comparative Proteomics of Salinity Stress Responses in Fish and Aquatic Invertebrates.” PROTEOMICS n/a (n/a): e202400255. https://doi.org/10.1002/pmic.202400255.
Longman, Emily K., and Eric Sanford. 2025a. “An Experimental Test of Eco-Evolutionary Dynamics on Rocky Shores.” Ecology 106 (1): e4505. https://doi.org/10.1002/ecy.4505.
Lubell, Mark, Tara Pozzi, Tanya Heikkila, Andrea K. Gerlak, and Pamela Rittelmeyer. 2025. “Learning in Polycentric Governance: Insights from the California Delta Science Enterprise.” Policy Studies Journal 53 (1): 7–28. https://doi.org/10.1111/psj.12581.
Overturf, Ken, Jason Abernathy, Dietmar Kültz, Jacob Bledsoe, Shawn Narum, and Thomas Welker. 2025. “Potential Physiological Mechanisms behind Variation in Rainbow Trout (Oncorhynchus Mykiss) to Biosynthesize EPA and DHA When Reared on Plant Oil Replacement Feeds.” Aquaculture Reports 41 (April):102655. https://doi.org/10.1016/j.aqrep.2025.102655.
Pagenkopp Lohan, Katrina M., Ruth DiMaria, Daniel L. Martin, A. Randall Hughes, Bradley J. Peterson, Katharyn E. Boyer, John J. Stachowicz, Pablo Jorgensen, Gregory M. Ruiz, and Cliff Ross. 2025. “Phylogeography of Labyrinthula Species and Strains Shows High Connectivity and Low Genetic Variation across Seagrass Hosts and Geographic Locations in North America.” Frontiers in Marine Science 11 (January):1463968. https://doi.org/10.3389/fmars.2024.1463968.
Peoples, Nick, Michael D. Burns, Michalis Mihalitsis, and Peter C. Wainwright. 2025. “Evolutionary Lability of a Key Innovation Spurs Rapid Diversification.” Nature 639 (8056): 962–67. https://doi.org/10.1038/s41586-025-08612-z.
Raymond, Joseph, Lucas S. Bair, Timothy D. Counihan, Wesley M. Daniel, Sofie Duntugan, Matthew E. Neilson, and Michael Springborn. 2025. “Don’t Move a Mussel: The Role of Key Environmental Drivers and Management Scale in Assessing Spatial Variation in Dreissenid Spread Risk in the Missouri River Basin.” Ecological Indicators 170 (January):112526. https://doi.org/10.1016/j.ecolind.2024.112526.
Reimer, Matthew N., Anthony Rogers, and James N. Sanchirico. 2025. “Managing for Adaptive Capacity in Climate-Ready Fisheries.” Marine Policy 174 (April):106601. https://doi.org/10.1016/j.marpol.2025.106601.
Roberts-Hugghis, Alexus S, Christopher M Martinez, Katherine A Corn, and Peter C Wainwright. 2025. “A Classic Key Innovation Constrains Oral Jaw Functional Diversification in Fishes.” Evolution Letters 9 (1): 24–40. https://doi.org/10.1093/evlett/qrae046.
Rogers-Bennett, Laura, Shelby K. Kawana, Cynthia A. Catton, Robert Klamt, Richard Dondanville, Athena Maguire, and Daniel K. Okamoto. n.d. “Abalone Recruitment Patterns before and after Sea Urchin Barrens Formation in Northern California: Incorporating Climate Change.” New Zealand Journal of Marine and Freshwater Research 0 (0): 1–17. https://doi.org/10.1080/00288330.2024.2403596.
Rumberger, Camille, Madison Armstrong, Martin Kim, Raquel Ponce, Josue Melendez, Melissa DeBiasse, Serena Caplins, and Rachael Bay. 2025. “Selection Over Small and Large Spatial Scales in the Face of High Gene Flow.” Molecular Ecology 34 (6): e17700. https://doi.org/10.1111/mec.17700.
Schenck, F. R., J. K. Baum, K. E. Boyer, J. E. Duffy, F. J. Fodrie, J. Gaeckle, T. C. Hanley, et al. 2025. “Host Traits and Temperature Predict Biogeographical Variation in Seagrass Disease Prevalence.” Proceedings of the Royal Society B: Biological Sciences 292 (2040): 20243055. https://doi.org/10.1098/rspb.2024.3055.
Sebastian, Peter J., Cory Schlesener, Barbara A. Byrne, Melissa Miller, Woutrina Smith, Francesca Batac, Caroline E. C. Goertz, Bart C. Weimer, and Christine K. Johnson. 2025. “Antimicrobial Resistance of Vibrio Spp. from the Coastal California System: Discordance between Genotypic and Phenotypic Patterns.” Applied and Environmental Microbiology 91 (3): e01808-24. https://doi.org/10.1128/aem.01808-24.
Steel, Anna E, Sarah E Baird, Matthew J Hansen, and Nann A Fangue. 2025. “Size Mediates Relative Risk and Anti-Predation Response in Juvenile Sturgeon.” Transactions of the American Fisheries Society, March, vnae009. https://doi.org/10.1093/tafafs/vnae00.
Walter, Jonathan A., Levi Lewis, James Hobbs, and Andrew Rypel. 2025. “Quantifying Changes in Fish Population Stability Using Statistical Early Warnings of Regime Shifts,” February. https://ecoevorxiv.org/repository/view/8617/.
Zillig, Kenneth W., Heather N. Bell, Alyssa M. FitzGerald, and Nann A. Fangue. 2025. “Patterns of Interpopulation Variation and Physiological Trade-Offs of the Acute Thermal Tolerance of Juvenile Chinook Salmon (Oncorhynchus Tshawytscha).” Frontiers in Fish Science 2 (January). https://doi.org/10.3389/frish.2024.1508746.
Zulian, Meghan, Esther G. Kennedy, Sara L. Hamilton, Tessa M. Hill, Genece V. Grisby, Aurora M. Ricart, Eric Sanford, Ana K. Spalding, Manuel Delgado, and Melissa Ward. 2025. “Assessing Benthic Invertebrate Vulnerability to Ocean Acidification and De-Oxygenation in California: The Importance of Effective Oceanographic Monitoring Networks.” PLOS ONE 20 (2): e0317906. https://doi.org/10.1371/journal.pone.0317906.