Recent Publications

Publications from CMSI affiliates in the past quarter:

Biefel, F., J. Geist, R. E. Connon, B. Harper, and S. M. Brander. 2024. “Interactive Effects between Water Temperature, Microparticle Compositions, and Fiber Types on the Marine Keystone Species Americamysis Bahia.” Environmental Pollution 348 (May):123906. https://doi.org/10.1016/j.envpol.2024.123906

Biefel, Felix, Christina Pasparakis, Dennis E. Cocherell, Tien-Chieh Hung, Evan W. Carson, Nann A. Fangue, Juergen P. Geist, Anne E. Todgham, and Richard E. Connon. 2024. “Turbidity and Temperature Effects on Growth and Gene Transcription of Threatened Juvenile Longfin Smelt (Spirinchus Thaleichthys).” Aquaculture, June, 741296. https://doi.org/10.1016/j.aquaculture.2024.741296

Burns, Michael D, Sarah T Friedman, Katherine A Corn, Olivier Larouche, Samantha A Price, Peter C Wainwright, and Edward D Burress. 2024. “High-Latitude Ocean Habitats Are a Crucible of Fish Body Shape Diversification.” Evolution Letters, May, qrae020. https://doi.org/10.1093/evlett/qrae020

Con, Pazit, Jens Hamar, Jakob Biran, Dietmar Kültz, and Avner Cnaani. 2024. “Cell-Based Homologous Expression System for in-Vitro Characterization of Environmental Effects on Transmembrane Peptide Transport in Fish.” Current Research in Physiology 7 (January):100118. https://doi.org/10.1016/j.crphys.2024.100118

Corona, Meranda, and Dietmar Kültz. 2024. “The Impacts of Osmotic Stress During the Critical Window of Development on Protein and Histone PTM Alterations in California Grunion.” Physiology 39 (S1): 1004. https://doi.org/10.1152/physiol.2024.39.S1.1004

Dong, Weizhen, Brenda Luu, Mandy Lin, Isabel Enriquez, Jens Hamar, and Dietmar Kültz. 2024. “Proteomic Profiling of Botryllus Schlosseri, an Emerging Model Organism.” Physiology 39 (S1): 627. https://doi.org/10.1152/physiol.2024.39.S1.627

Ellison, Christina I., Madeline R. Frey, Eric Sanford, and Svetlana Maslakova. 2024. “Ribbon Worms (Phylum Nemertea) from Bodega Bay, California: A Largely Undescribed Diversity.” ZooKeys 1204 (June):15–64. https://doi.org/10.3897/zookeys.1204.117869

Gross, Collin P., and John J. Stachowicz. 2024. “Extending Trait Dispersion across Trophic Levels: Predator Assemblages Act as Top-down Filters on Prey Communities.” Ecology 105 (7): e4320. https://doi.org/10.1002/ecy.4320

Huff Hartz, Kara E., Katie J. Knaub, Md. Habibullah-Al-Mamun, Richard E. Connon, Greg W. Whitledge, Amélie Segarra, and Michael J. Lydy. 2024. “Using an Internal Body Residue Approach to Assess Acute Pesticide Toxicity in Juvenile Chinook Salmon (Oncorhynchus Tshawytscha).” Environmental Pollution 346 (April):123364. https://doi.org/10.1016/j.envpol.2024.123364

Kachmar, M. L., K. S. Reece, M. V. Agnew, H. J. Schreier, and C. A. Burge. 2024. “Susceptibility of Shellfish Aquaculture Species in the Chesapeake Bay and Maryland Coastal Bays to Ostreid Herpesvirus 1 Microvariants.” Diseases of Aquatic Organisms 157 (March):113–27. https://doi.org/10.3354/dao03775

Kennedy, Esther G., Meghan Zulian, Sara L. Hamilton, Tessa M. Hill, Manuel Delgado, Carina R. Fish, Brian Gaylord, et al. 2024. “A High-Resolution Synthesis Dataset for Multistressor Analyses along the US West Coast.” Earth System Science Data 16 (1): 219–43. https://doi.org/10.5194/essd-16-219-2024

Khatri, Hemant, Stephen M. Griffies, Benjamin A. Storer, Michele Buzzicotti, Hussein Aluie, Maike Sonnewald, Raphael Dussin, and Andrew Shao. 2024. “A Scale-Dependent Analysis of the Barotropic Vorticity Budget in a Global Ocean Simulation.” Journal of Advances in Modeling Earth Systems 16 (6): e2023MS003813. https://doi.org/10.1029/2023MS003813

Kunselman, Emily, Sarah Allard, Colleen Burge, Blythe Marshman, Alyssa Frederick, and Jack Gilbert. 2024. “Metagenome-Assembled Genome of Withering Syndrome Causative Agent, “Candidatus Xenohaliotis Californiensis,“ from Endangered White Abalone (Haliotis Sorenseni).” Microbiology Resource Announcements 13 (6): e00086-24. https://doi.org/10.1128/mra.00086-24

Kunselman, Emily, Daysi Manrique, Colleen A Burge, Sarah Allard, Zachary Daniel, Guillaume Mitta, Bruno Petton, and Jack A Gilbert. 2024. “Temperature and Microbe Mediated Impacts of the San Diego Bay Ostreid Herpesvirus (OsHV-1) Microvariant on Juvenile Pacific Oysters.” Sustainable Microbiology 1 (1): qvae014. https://doi.org/10.1093/sumbio/qvae014

Mihalitsis, Michalis, David R. Bellwood, and Peter C. Wainwright. 2023. “Sit and Survive: Predation Avoidance by Cryptobenthic Coral Reef Fishes.” Marine Biology 171 (1): 7. https://doi.org/10.1007/s00227-023-04330-0

Mildenberger, Matto, Alexander Sahn, Chris Miljanich, Michelle A. Hummel, Mark Lubell, and Jennifer R. Marlon. 2024. “Unintended Consequences of Using Maps to Communicate Sea-Level Rise.” Nature Sustainability, June, 1–9. https://doi.org/10.1038/s41893-024-01380-0

Neylan, Isabelle P., Daniel S. Swezey, Sara E. Boles, Jackson A. Gross, Andrew Sih, and John J. Stachowicz. 2024. “Within- and Transgenerational Stress Legacy Effects of Ocean Acidification on Red Abalone (Haliotis Rufescens) Growth and Survival.” Global Change Biology 30 (1): e17048. https://doi.org/10.1111/gcb.17048

Ninokawa, Aaron T., Alisha M. Saley, Roya Shalchi, and Brian Gaylord. 2024. “Multiple Carbonate System Parameters Independently Govern Shell Formation in a Marine Mussel.” Communications Earth & Environment 5 (1): 1–13. https://doi.org/10.1038/s43247-024-01440-5

Pereira, Ana, Anya Brown, Davis Strobel, Marta C. Soares, Raquel Xavier, Amy Apprill, and Paul Sikkel. 2024. “Effects of Two Common Antibiotics on the Skin Microbiome of Ornamental Reef Fishes: Implications for Manipulative Experiments in Microbial Dynamics.” Aquaculture, Fish and Fisheries 4 (3): e162. https://doi.org/10.1002/aff2.162

Robinson, Stacie, Kim Falinski, Devin Johnson, Elizabeth VanWormer, Karen Shapiro, Angela Amlin, and Michelle Barbieri. 2024. “Evaluating the Risk Landscape of Hawaiian Monk Seal Exposure to Toxoplasma Gondii.” EcoHealth, June. https://doi.org/10.1007/s10393-024-01678-7

Rossi, Valentina, Carlo Pipitone, Katherine L. Yates, Fabio Badalamenti, Giovanni D’Anna, Cristina Pita, Fátima L. Alves, et al. 2024. “Poor Online Information on European Marine Protected Areas Impairs Public Participation under the Aarhus Convention.” Marine Policy 161 (March):106012. https://doi.org/10.1016/j.marpol.2024.106012

Sierra, Noémie C., and David A. Gold. 2024. “The Evolution of Cnidarian Stinging Cells Supports a Precambrian Radiation of Animal Predators.” Evolution & Development 26 (2): e12469. https://doi.org/10.1111/ede.12469

Sundararaman, Balaji, Karen Shapiro, Andrea Packham, Lauren E. Camp, Rachel S. Meyer, Beth Shapiro, and Richard E. Green. 2024. “Whole Genome Enrichment Approach for Genomic Surveillance of Toxoplasma Gondii.” Food Microbiology 118 (April):104403. https://doi.org/10.1016/j.fm.2023.104403

Thompson, Neil F., M. Victoria Agnew, Bernarda Calla, and Colleen A. Burge. 2024. “Assessing Selection Potential for Pacific Oyster (Crassostrea Gigas) to a North American OsHV-1 Μvar: Comparing Two Experimental Assay Methods.” Aquaculture 590 (September):741076. https://doi.org/10.1016/j.aquaculture.2024.741076

Vantaggiato, Francesca Pia, and Mark Lubell. 2024. “Governing Sea Level Rise in a Polycentric System: Easier Said than Done.” Organizational Response to Climate Change: Businesses, Governments, March. https://doi.org/10.1017/9781009433594

Vriesman, Veronica Padilla, Jessica R. Bean, Hannah M. Palmer, and Roxanne M. W. Banker. 2024. “Interpreting Life-History Traits, Seasonal Cycles, and Coastal Climate from an Intertidal Mussel Species: Insights from 9000 Years of Synthesized Stable Isotope Data.” PLOS ONE 19 (5): e0302945. https://doi.org/10.1371/journal.pone.0302945

Wainwright, Peter C. 2024. “Deep Sea Evolution: Glowing Lures, Parasitic Males and Rapid Speciation in Anglerfishes.” Current Biology 34 (11): R549–51. https://doi.org/10.1016/j.cub.2024.04.077.

Yu, Lei, Jessie Renton, Agata Burian, Marina Khachaturyan, Till Bayer, Jonne Kotta, John J. Stachowicz, et al. 2024. “A Somatic Genetic Clock for Clonal Species.” Nature Ecology & Evolution, June, 1–10. https://doi.org/10.1038/s41559-024-02439-z

Ziegler, Shelby L., Rachel O. Brooks, Lyall F. Bellquist, Jennifer E. Caselle, Steven G. Morgan, Timothy J. Mulligan, Benjamin I. Ruttenberg, et al. 2024. “Collaborative Fisheries Research Reveals Reserve Size and Age Determine Efficacy across a Network of Marine Protected Areas.” Conservation Letters 17 (2): e13000. https://doi.org/10.1111/conl.13000